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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7288324 chr22:33136886 A/C TOP3B chr22:22311397-22337213:- -0.38 -6.61 1.01E-10 Box Plot
THCA rs7288324 chr22:33136886 A/C TRMU chr22:46726772-46753237:+ -0.33 -6.38 4.21E-10 Box Plot
THCA rs7288324 chr22:33136886 A/C TUBGCP6 chr22:50656118-50683421:- -0.37 -7.42 5.44E-13 Box Plot
THCA rs7288324 chr22:33136886 A/C TUG1 chr22:31366663-31375381:+ -0.47 -7.51 2.93E-13 Box Plot
THCA rs7288324 chr22:33136886 A/C TXN2 chr22:36863083-36878077:- -0.46 -8.07 5.81E-15 Box Plot
THCA rs7288324 chr22:33136886 A/C UBE2L3 chr22:21903736-21978323:+ -0.38 -6.05 2.94E-9 Box Plot
THCA rs7288324 chr22:33136886 A/C UQCR10 chr22:30163358-30166402:+ -0.34 -7.09 4.73E-12 Box Plot
THCA rs7288324 chr22:33136886 A/C XPNPEP3 chr22:41253081-41328819:+ -0.41 -6.07 2.65E-9 Box Plot
THCA rs7288324 chr22:33136886 A/C XRCC6 chr22:42017123-42060052:+ -0.38 -5.97 4.51E-9 Box Plot
THCA rs7288324 chr22:33136886 A/C ZC3H7B chr22:41697526-41756151:+ -0.43 -6.38 4.14E-10 Box Plot
THCA rs7288324 chr22:33136886 A/C ZMAT5 chr22:30126945-30163000:- -0.32 -6.36 4.66E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C ACO2 chr22:41865129-41924993:+ 0.57 6.82 2.71E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C ADSL chr22:40742504-40786467:+ 0.6 6.56 1.4E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C ALG12 chr22:50293877-50312106:- 0.52 6.1 2.21E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C ANKRD54 chr22:38226862-38245334:- 0.56 6.47 2.42E-10 Box Plot